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Cluster: Rep_399_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_399_c_0 Rep_399_c_0_956 1164367 1167381 - 1.B.14.6.1
CAZyme Rep_399_c_0 Rep_399_c_0_957 1167502 1169973 - GH127
pfam Rep_399_c_0 Rep_399_c_0_958 1170390 1171775 + DUF6055
CAZyme Rep_399_c_0 Rep_399_c_0_959 1171831 1173813 + GH97
CAZyme Rep_399_c_0 Rep_399_c_0_960 1173977 1176394 + CBM32 | GH43_34
CAZyme Rep_399_c_0 Rep_399_c_0_961 1176456 1178900 + GH127
pfam Rep_399_c_0 Rep_399_c_0_962 1179222 1180562 + DDE_Tnp_1
TC Rep_399_c_0 Rep_399_c_0_963 1181351 1181938 + 9.B.171.1.2
Gene ID: Rep_399_c_0_956
Type: TC
Location: 1164367 - 1167381 (-)
Gene ID: Rep_399_c_0_957
Type: CAZyme
Location: 1167502 - 1169973 (-)
Gene ID: Rep_399_c_0_958
Type: pfam
Location: 1170390 - 1171775 (+)
Gene ID: Rep_399_c_0_959
Type: CAZyme
Location: 1171831 - 1173813 (+)
Gene ID: Rep_399_c_0_960
Type: CAZyme
Location: 1173977 - 1176394 (+)
Gene ID: Rep_399_c_0_961
Type: CAZyme
Location: 1176456 - 1178900 (+)
Gene ID: Rep_399_c_0_962
Type: pfam
Location: 1179222 - 1180562 (+)
Gene ID: Rep_399_c_0_963
Type: TC
Location: 1181351 - 1181938 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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