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Cluster: Rep_399_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_399_c_0 Rep_399_c_0_935 1132955 1136050 - 1.B.14.6.1
TF Rep_399_c_0 Rep_399_c_0_936 1136294 1139029 - HTH_AraC
CAZyme Rep_399_c_0 Rep_399_c_0_937 1139398 1141242 + GH32
TC Rep_399_c_0 Rep_399_c_0_938 1141261 1142445 + 2.A.1.7.17
Gene ID: Rep_399_c_0_935
Type: TC
Location: 1132955 - 1136050 (-)
Gene ID: Rep_399_c_0_936
Type: TF
Location: 1136294 - 1139029 (-)
Gene ID: Rep_399_c_0_937
Type: CAZyme
Location: 1139398 - 1141242 (+)
Gene ID: Rep_399_c_0_938
Type: TC
Location: 1141261 - 1142445 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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