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Cluster: Rep_399_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_399_c_0 Rep_399_c_0_663 804338 806713 - GT51
pfam Rep_399_c_0 Rep_399_c_0_664 806905 807516 + DNA_alkylation
NULL(UNKNOWN) Rep_399_c_0 Rep_399_c_0_665 807566 808114 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_399_c_0 Rep_399_c_0_666 808391 809542 + GT9
pfam Rep_399_c_0 Rep_399_c_0_667 809669 811408 + Endonuclease_1
pfam Rep_399_c_0 Rep_399_c_0_668 811560 812549 + DAGK_cat | YegS_C
CAZyme Rep_399_c_0 Rep_399_c_0_669 812562 813518 + GT2
CAZyme Rep_399_c_0 Rep_399_c_0_670 813520 814473 - GH43_19
CAZyme Rep_399_c_0 Rep_399_c_0_671 814584 817112 + GH2
pfam Rep_399_c_0 Rep_399_c_0_672 817134 818450 - T9SS_plug_1st
pfam Rep_399_c_0 Rep_399_c_0_673 818468 819130 - UDG
TC Rep_399_c_0 Rep_399_c_0_674 819378 820577 - 1.B.6.1.6
Gene ID: Rep_399_c_0_663
Type: CAZyme
Location: 804338 - 806713 (-)
Gene ID: Rep_399_c_0_664
Type: pfam
Location: 806905 - 807516 (+)
Gene ID: Rep_399_c_0_665
Type:
Location: 807566 - 808114 (-)
Gene ID: Rep_399_c_0_666
Type: CAZyme
Location: 808391 - 809542 (+)
Gene ID: Rep_399_c_0_667
Type: pfam
Location: 809669 - 811408 (+)
Gene ID: Rep_399_c_0_668
Type: pfam
Location: 811560 - 812549 (+)
Gene ID: Rep_399_c_0_669
Type: CAZyme
Location: 812562 - 813518 (+)
Gene ID: Rep_399_c_0_670
Type: CAZyme
Location: 813520 - 814473 (-)
Gene ID: Rep_399_c_0_671
Type: CAZyme
Location: 814584 - 817112 (+)
Gene ID: Rep_399_c_0_672
Type: pfam
Location: 817134 - 818450 (-)
Gene ID: Rep_399_c_0_673
Type: pfam
Location: 818468 - 819130 (-)
Gene ID: Rep_399_c_0_674
Type: TC
Location: 819378 - 820577 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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