dbCAN Logo

Cluster: Rep_396_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_396_c_6 Rep_396_c_6_1 2 2698 - CBM6 | GH3
pfam Rep_396_c_6 Rep_396_c_6_2 2873 3409 + Sua5_yciO_yrdC
pfam Rep_396_c_6 Rep_396_c_6_3 3444 4568 + Bac_transf
TC Rep_396_c_6 Rep_396_c_6_4 4606 4869 + 9.B.18.1.3
TC Rep_396_c_6 Rep_396_c_6_5 4885 6702 + 2.A.49.6.1
pfam Rep_396_c_6 Rep_396_c_6_6 6739 7317 + RuvA_N | RuvA_C | HHH_5
TC Rep_396_c_6 Rep_396_c_6_7 7325 8158 + 9.A.25.1.1
TC Rep_396_c_6 Rep_396_c_6_8 8197 13653 + 9.A.25.1.1
NULL(UNKNOWN) Rep_396_c_6 Rep_396_c_6_9 13602 13742 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_396_c_6 Rep_396_c_6_10 13854 14756 + 9.A.25.1.1
Gene ID: Rep_396_c_6_1
Type: CAZyme
Location: 2 - 2698 (-)
Gene ID: Rep_396_c_6_2
Type: pfam
Location: 2873 - 3409 (+)
Gene ID: Rep_396_c_6_3
Type: pfam
Location: 3444 - 4568 (+)
Gene ID: Rep_396_c_6_4
Type: TC
Location: 4606 - 4869 (+)
Gene ID: Rep_396_c_6_5
Type: TC
Location: 4885 - 6702 (+)
Gene ID: Rep_396_c_6_6
Type: pfam
Location: 6739 - 7317 (+)
Gene ID: Rep_396_c_6_7
Type: TC
Location: 7325 - 8158 (+)
Gene ID: Rep_396_c_6_8
Type: TC
Location: 8197 - 13653 (+)
Gene ID: Rep_396_c_6_9
Type:
Location: 13602 - 13742 (+)
Gene ID: Rep_396_c_6_10
Type: TC
Location: 13854 - 14756 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
UBA7173
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List