dbCAN Logo

Cluster: Rep_396_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_396_c_18 Rep_396_c_18_333 391618 393813 - GH3
TF Rep_396_c_18 Rep_396_c_18_334 394076 398116 + HTH_AraC
CAZyme Rep_396_c_18 Rep_396_c_18_335 398113 400566 + GH106
NULL(UNKNOWN) Rep_396_c_18 Rep_396_c_18_336 401180 401332 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_396_c_18 Rep_396_c_18_337 401535 402692 + AAA_14 | DUF4143
TC Rep_396_c_18 Rep_396_c_18_338 402812 404269 + 1.B.9.1.2
pfam Rep_396_c_18 Rep_396_c_18_339 404536 405414 + DUF3737
STP Rep_396_c_18 Rep_396_c_18_340 405414 406607 + Aminotran_1_2
TC Rep_396_c_18 Rep_396_c_18_341 406811 408139 + 2.A.66.1.9
Gene ID: Rep_396_c_18_333
Type: CAZyme
Location: 391618 - 393813 (-)
Gene ID: Rep_396_c_18_334
Type: TF
Location: 394076 - 398116 (+)
Gene ID: Rep_396_c_18_335
Type: CAZyme
Location: 398113 - 400566 (+)
Gene ID: Rep_396_c_18_336
Type:
Location: 401180 - 401332 (+)
Gene ID: Rep_396_c_18_337
Type: pfam
Location: 401535 - 402692 (+)
Gene ID: Rep_396_c_18_338
Type: TC
Location: 402812 - 404269 (+)
Gene ID: Rep_396_c_18_339
Type: pfam
Location: 404536 - 405414 (+)
Gene ID: Rep_396_c_18_340
Type: STP
Location: 405414 - 406607 (+)
Gene ID: Rep_396_c_18_341
Type: TC
Location: 406811 - 408139 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
UBA7173
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List