dbCAN HGM

Cluster: Rep_396_CGC25

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_396_c_18	Rep_396_c_18_300	343268	346549	+	1.B.14.6.1
pfam	Rep_396_c_18	Rep_396_c_18_301	346642	348438	+	SusD_RagB \| SusD-like_3
pfam	Rep_396_c_18	Rep_396_c_18_302	348469	350136	+	DUF5123
CAZyme	Rep_396_c_18	Rep_396_c_18_303	350184	351872	+	CBM91 \| GH43_10
CAZyme	Rep_396_c_18	Rep_396_c_18_304	352078	353991	-	CE20 \| CE20
CAZyme	Rep_396_c_18	Rep_396_c_18_305	354007	355524	-	GH2
sulfatase	Rep_396_c_18	Rep_396_c_18_306	355533	355814	-	S1_4
CAZyme	Rep_396_c_18	Rep_396_c_18_307	355868	358369	-	GH2
CAZyme	Rep_396_c_18	Rep_396_c_18_308	358632	360011	-	GH127

Gene ID: Rep_396_c_18_300
Type: TC
Location: 343268 - 346549 (+)

Gene ID: Rep_396_c_18_301
Type: pfam
Location: 346642 - 348438 (+)

Gene ID: Rep_396_c_18_302
Type: pfam
Location: 348469 - 350136 (+)

Gene ID: Rep_396_c_18_303
Type: CAZyme
Location: 350184 - 351872 (+)

Gene ID: Rep_396_c_18_304
Type: CAZyme
Location: 352078 - 353991 (-)

Gene ID: Rep_396_c_18_305
Type: CAZyme
Location: 354007 - 355524 (-)

Gene ID: Rep_396_c_18_306
Type: sulfatase
Location: 355533 - 355814 (-)

Gene ID: Rep_396_c_18_307
Type: CAZyme
Location: 355868 - 358369 (-)

Gene ID: Rep_396_c_18_308
Type: CAZyme
Location: 358632 - 360011 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.