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Cluster: Rep_392_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_392_c_9 Rep_392_c_9_1 340 1707 + 9.B.145.1.2
CAZyme Rep_392_c_9 Rep_392_c_9_2 1822 4155 - CBM26 | GH13_37
peptidase Rep_392_c_9 Rep_392_c_9_3 4165 5793 - M26.UPW
TC Rep_392_c_9 Rep_392_c_9_4 5946 6614 - 1.A.16.5.2
CAZyme Rep_392_c_9 Rep_392_c_9_5 6739 7830 + GH53
Gene ID: Rep_392_c_9_1
Type: TC
Location: 340 - 1707 (+)
Gene ID: Rep_392_c_9_2
Type: CAZyme
Location: 1822 - 4155 (-)
Gene ID: Rep_392_c_9_3
Type: peptidase
Location: 4165 - 5793 (-)
Gene ID: Rep_392_c_9_4
Type: TC
Location: 5946 - 6614 (-)
Gene ID: Rep_392_c_9_5
Type: CAZyme
Location: 6739 - 7830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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