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Cluster: Rep_392_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_392_c_6 Rep_392_c_6_1 201 2030 - GH13_6
STP Rep_392_c_6 Rep_392_c_6_2 2218 3012 - Fer4
pfam Rep_392_c_6 Rep_392_c_6_3 3017 4174 - Smr | DUF2027
TC Rep_392_c_6 Rep_392_c_6_4 4509 4916 + 2.A.7.34.3
CAZyme Rep_392_c_6 Rep_392_c_6_5 5093 7549 + GH2
Gene ID: Rep_392_c_6_1
Type: CAZyme
Location: 201 - 2030 (-)
Gene ID: Rep_392_c_6_2
Type: STP
Location: 2218 - 3012 (-)
Gene ID: Rep_392_c_6_3
Type: pfam
Location: 3017 - 4174 (-)
Gene ID: Rep_392_c_6_4
Type: TC
Location: 4509 - 4916 (+)
Gene ID: Rep_392_c_6_5
Type: CAZyme
Location: 5093 - 7549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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