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Cluster: Rep_392_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_392_c_65 Rep_392_c_65_1 672 3071 - CBM35
peptidase Rep_392_c_65 Rep_392_c_65_2 3311 4966 + C69.UPW
pfam Rep_392_c_65 Rep_392_c_65_3 5064 5549 + QueF
TC Rep_392_c_65 Rep_392_c_65_4 5552 6772 - 2.A.1.46.5
pfam Rep_392_c_65 Rep_392_c_65_5 6905 8278 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme Rep_392_c_65 Rep_392_c_65_6 8288 10129 + PL12_3
CAZyme Rep_392_c_65 Rep_392_c_65_7 10174 11370 + GT4
Gene ID: Rep_392_c_65_1
Type: CAZyme
Location: 672 - 3071 (-)
Gene ID: Rep_392_c_65_2
Type: peptidase
Location: 3311 - 4966 (+)
Gene ID: Rep_392_c_65_3
Type: pfam
Location: 5064 - 5549 (+)
Gene ID: Rep_392_c_65_4
Type: TC
Location: 5552 - 6772 (-)
Gene ID: Rep_392_c_65_5
Type: pfam
Location: 6905 - 8278 (+)
Gene ID: Rep_392_c_65_6
Type: CAZyme
Location: 8288 - 10129 (+)
Gene ID: Rep_392_c_65_7
Type: CAZyme
Location: 10174 - 11370 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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