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Cluster: Rep_392_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_392_c_61 Rep_392_c_61_3 2822 4660 + 2.A.47.4.8
STP Rep_392_c_61 Rep_392_c_61_4 4678 6846 - HATPase_c | HisKA
TC Rep_392_c_61 Rep_392_c_61_5 7046 9754 - 3.A.3.2.17
CAZyme Rep_392_c_61 Rep_392_c_61_6 9827 10771 - GT2
CAZyme Rep_392_c_61 Rep_392_c_61_7 10768 11556 - CE4
CAZyme Rep_392_c_61 Rep_392_c_61_8 11714 13528 + GT83
pfam Rep_392_c_61 Rep_392_c_61_9 13540 14583 + Acyl_transf_3
NULL(UNKNOWN) Rep_392_c_61 Rep_392_c_61_10 14721 15605 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_392_c_61 Rep_392_c_61_11 16090 19554 - 3.A.5.1.1
Gene ID: Rep_392_c_61_3
Type: TC
Location: 2822 - 4660 (+)
Gene ID: Rep_392_c_61_4
Type: STP
Location: 4678 - 6846 (-)
Gene ID: Rep_392_c_61_5
Type: TC
Location: 7046 - 9754 (-)
Gene ID: Rep_392_c_61_6
Type: CAZyme
Location: 9827 - 10771 (-)
Gene ID: Rep_392_c_61_7
Type: CAZyme
Location: 10768 - 11556 (-)
Gene ID: Rep_392_c_61_8
Type: CAZyme
Location: 11714 - 13528 (+)
Gene ID: Rep_392_c_61_9
Type: pfam
Location: 13540 - 14583 (+)
Gene ID: Rep_392_c_61_10
Type:
Location: 14721 - 15605 (-)
Gene ID: Rep_392_c_61_11
Type: TC
Location: 16090 - 19554 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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