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Cluster: Rep_392_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_392_c_29 Rep_392_c_29_34 44377 47607 - 2.A.6.2.16
TC Rep_392_c_29 Rep_392_c_29_35 47621 48742 - 2.A.6.2.47
TC Rep_392_c_29 Rep_392_c_29_36 48789 50216 - 1.B.17.3.8
pfam Rep_392_c_29 Rep_392_c_29_37 50413 52785 + Toprim | Zn_ribbon_DnaG | DNAG_N | DnaB_bind | Toprim_2 | Toprim_4
TC Rep_392_c_29 Rep_392_c_29_38 53213 54364 - 2.A.1.2.14
TC Rep_392_c_29 Rep_392_c_29_39 54397 56439 - 1.B.14.15.2
STP Rep_392_c_29 Rep_392_c_29_40 56449 57390 - Pribosyltran
CAZyme Rep_392_c_29 Rep_392_c_29_41 57434 59230 - GH13_38
pfam Rep_392_c_29 Rep_392_c_29_42 59260 60114 - Patatin
TC Rep_392_c_29 Rep_392_c_29_43 60157 61620 - 2.A.103.1.2
Gene ID: Rep_392_c_29_34
Type: TC
Location: 44377 - 47607 (-)
Gene ID: Rep_392_c_29_35
Type: TC
Location: 47621 - 48742 (-)
Gene ID: Rep_392_c_29_36
Type: TC
Location: 48789 - 50216 (-)
Gene ID: Rep_392_c_29_37
Type: pfam
Location: 50413 - 52785 (+)
Gene ID: Rep_392_c_29_38
Type: TC
Location: 53213 - 54364 (-)
Gene ID: Rep_392_c_29_39
Type: TC
Location: 54397 - 56439 (-)
Gene ID: Rep_392_c_29_40
Type: STP
Location: 56449 - 57390 (-)
Gene ID: Rep_392_c_29_41
Type: CAZyme
Location: 57434 - 59230 (-)
Gene ID: Rep_392_c_29_42
Type: pfam
Location: 59260 - 60114 (-)
Gene ID: Rep_392_c_29_43
Type: TC
Location: 60157 - 61620 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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