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Cluster: Rep_392_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_392_c_26 Rep_392_c_26_4 2969 3916 - 2.A.7.3.28
pfam Rep_392_c_26 Rep_392_c_26_5 4087 4536 - DUF3127
TC Rep_392_c_26 Rep_392_c_26_6 4746 5714 + 2.A.7.3.36
TC Rep_392_c_26 Rep_392_c_26_7 5737 7530 - 3.A.1.120.5
pfam Rep_392_c_26 Rep_392_c_26_8 7631 7951 + FeS_assembly_P
pfam Rep_392_c_26 Rep_392_c_26_9 7951 8703 + Metallophos
CAZyme Rep_392_c_26 Rep_392_c_26_10 9012 9863 - GT2
CAZyme Rep_392_c_26 Rep_392_c_26_11 9897 10901 - GT2
pfam Rep_392_c_26 Rep_392_c_26_12 10996 11757 + adh_short | KR | adh_short_C2
TC Rep_392_c_26 Rep_392_c_26_13 11846 13033 - 3.A.5.8.1
TC Rep_392_c_26 Rep_392_c_26_14 13047 13673 - 3.A.8.1.1
Gene ID: Rep_392_c_26_4
Type: TC
Location: 2969 - 3916 (-)
Gene ID: Rep_392_c_26_5
Type: pfam
Location: 4087 - 4536 (-)
Gene ID: Rep_392_c_26_6
Type: TC
Location: 4746 - 5714 (+)
Gene ID: Rep_392_c_26_7
Type: TC
Location: 5737 - 7530 (-)
Gene ID: Rep_392_c_26_8
Type: pfam
Location: 7631 - 7951 (+)
Gene ID: Rep_392_c_26_9
Type: pfam
Location: 7951 - 8703 (+)
Gene ID: Rep_392_c_26_10
Type: CAZyme
Location: 9012 - 9863 (-)
Gene ID: Rep_392_c_26_11
Type: CAZyme
Location: 9897 - 10901 (-)
Gene ID: Rep_392_c_26_12
Type: pfam
Location: 10996 - 11757 (+)
Gene ID: Rep_392_c_26_13
Type: TC
Location: 11846 - 13033 (-)
Gene ID: Rep_392_c_26_14
Type: TC
Location: 13047 - 13673 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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