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Cluster: Rep_392_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_392_c_14 Rep_392_c_14_3 2951 4231 - GT30
pfam Rep_392_c_14 Rep_392_c_14_4 4292 5830 - tRNA-synt_1c | Anticodon_2
TC Rep_392_c_14 Rep_392_c_14_5 5982 7631 - 4.C.1.1.4
pfam Rep_392_c_14 Rep_392_c_14_6 7823 8878 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
pfam Rep_392_c_14 Rep_392_c_14_7 8965 9396 - VanZ
TC Rep_392_c_14 Rep_392_c_14_8 9602 10708 + 3.D.2.1.1
Gene ID: Rep_392_c_14_3
Type: CAZyme
Location: 2951 - 4231 (-)
Gene ID: Rep_392_c_14_4
Type: pfam
Location: 4292 - 5830 (-)
Gene ID: Rep_392_c_14_5
Type: TC
Location: 5982 - 7631 (-)
Gene ID: Rep_392_c_14_6
Type: pfam
Location: 7823 - 8878 (+)
Gene ID: Rep_392_c_14_7
Type: pfam
Location: 8965 - 9396 (-)
Gene ID: Rep_392_c_14_8
Type: TC
Location: 9602 - 10708 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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