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Cluster: Rep_389_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_389_c_15 Rep_389_c_15_15 17929 19380 - 2.A.2.3.6
CAZyme Rep_389_c_15 Rep_389_c_15_16 19480 21057 - GH26
CAZyme Rep_389_c_15 Rep_389_c_15_17 21087 22256 - GH130_1
CAZyme Rep_389_c_15 Rep_389_c_15_18 22332 23468 - GH26
CAZyme Rep_389_c_15 Rep_389_c_15_19 23611 24999 - GH26
pfam Rep_389_c_15 Rep_389_c_15_20 25031 26356 - SGBP_B_XBD
pfam Rep_389_c_15 Rep_389_c_15_21 26395 28089 - SusD_RagB | SusD-like_3
TC Rep_389_c_15 Rep_389_c_15_22 28114 31320 - 1.B.14.6.1
CAZyme Rep_389_c_15 Rep_389_c_15_23 31764 33968 + GH36
Gene ID: Rep_389_c_15_15
Type: TC
Location: 17929 - 19380 (-)
Gene ID: Rep_389_c_15_16
Type: CAZyme
Location: 19480 - 21057 (-)
Gene ID: Rep_389_c_15_17
Type: CAZyme
Location: 21087 - 22256 (-)
Gene ID: Rep_389_c_15_18
Type: CAZyme
Location: 22332 - 23468 (-)
Gene ID: Rep_389_c_15_19
Type: CAZyme
Location: 23611 - 24999 (-)
Gene ID: Rep_389_c_15_20
Type: pfam
Location: 25031 - 26356 (-)
Gene ID: Rep_389_c_15_21
Type: pfam
Location: 26395 - 28089 (-)
Gene ID: Rep_389_c_15_22
Type: TC
Location: 28114 - 31320 (-)
Gene ID: Rep_389_c_15_23
Type: CAZyme
Location: 31764 - 33968 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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