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Cluster: Rep_389_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_389_c_58 Rep_389_c_58_12 10234 11337 - GT28
TC Rep_389_c_58 Rep_389_c_58_13 11420 12736 - 2.A.103.1.2
pfam Rep_389_c_58 Rep_389_c_58_14 12765 14162 - Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC Rep_389_c_58 Rep_389_c_58_15 14186 15451 - 9.B.146.1.3
Gene ID: Rep_389_c_58_12
Type: CAZyme
Location: 10234 - 11337 (-)
Gene ID: Rep_389_c_58_13
Type: TC
Location: 11420 - 12736 (-)
Gene ID: Rep_389_c_58_14
Type: pfam
Location: 12765 - 14162 (-)
Gene ID: Rep_389_c_58_15
Type: TC
Location: 14186 - 15451 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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