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Cluster: Rep_389_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_389_c_57 Rep_389_c_57_3 873 2141 - 2.A.1.2.97
CAZyme Rep_389_c_57 Rep_389_c_57_4 2228 3370 - GH53
pfam Rep_389_c_57 Rep_389_c_57_5 3764 4450 + Form_Nir_trans
TC Rep_389_c_57 Rep_389_c_57_6 4453 5877 - 9.B.145.1.2
TC Rep_389_c_57 Rep_389_c_57_7 6099 7208 + 2.A.86.1.6
CAZyme Rep_389_c_57 Rep_389_c_57_8 7322 9664 + GH35
Gene ID: Rep_389_c_57_3
Type: TC
Location: 873 - 2141 (-)
Gene ID: Rep_389_c_57_4
Type: CAZyme
Location: 2228 - 3370 (-)
Gene ID: Rep_389_c_57_5
Type: pfam
Location: 3764 - 4450 (+)
Gene ID: Rep_389_c_57_6
Type: TC
Location: 4453 - 5877 (-)
Gene ID: Rep_389_c_57_7
Type: TC
Location: 6099 - 7208 (+)
Gene ID: Rep_389_c_57_8
Type: CAZyme
Location: 7322 - 9664 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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