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Cluster: Rep_389_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_389_c_50 Rep_389_c_50_30 34570 36900 + GH20
pfam Rep_389_c_50 Rep_389_c_50_31 37029 37628 + EFP | EFP_N | Elong-fact-P_C
TC Rep_389_c_50 Rep_389_c_50_32 37733 38449 - 1.A.8.13.2
TC Rep_389_c_50 Rep_389_c_50_33 38569 39546 - 2.A.19.5.2
Gene ID: Rep_389_c_50_30
Type: CAZyme
Location: 34570 - 36900 (+)
Gene ID: Rep_389_c_50_31
Type: pfam
Location: 37029 - 37628 (+)
Gene ID: Rep_389_c_50_32
Type: TC
Location: 37733 - 38449 (-)
Gene ID: Rep_389_c_50_33
Type: TC
Location: 38569 - 39546 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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