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Cluster: Rep_389_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_389_c_39 Rep_389_c_39_9 7992 10106 - GH36
CAZyme Rep_389_c_39 Rep_389_c_39_10 10195 12120 - CE20 | CE20
TF Rep_389_c_39 Rep_389_c_39_11 12253 16284 - HTH_AraC
CAZyme Rep_389_c_39 Rep_389_c_39_12 16310 18448 - GH92
CAZyme Rep_389_c_39 Rep_389_c_39_13 18596 20986 - GH36
pfam Rep_389_c_39 Rep_389_c_39_14 21182 22912 - FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3
pfam Rep_389_c_39 Rep_389_c_39_15 23122 24708 - SusD_RagB | SusD-like_3
TC Rep_389_c_39 Rep_389_c_39_16 24738 27851 - 1.B.14.6.1
CAZyme Rep_389_c_39 Rep_389_c_39_17 27990 30578 - GH2
CAZyme Rep_389_c_39 Rep_389_c_39_18 30628 32976 - GH95
Gene ID: Rep_389_c_39_9
Type: CAZyme
Location: 7992 - 10106 (-)
Gene ID: Rep_389_c_39_10
Type: CAZyme
Location: 10195 - 12120 (-)
Gene ID: Rep_389_c_39_11
Type: TF
Location: 12253 - 16284 (-)
Gene ID: Rep_389_c_39_12
Type: CAZyme
Location: 16310 - 18448 (-)
Gene ID: Rep_389_c_39_13
Type: CAZyme
Location: 18596 - 20986 (-)
Gene ID: Rep_389_c_39_14
Type: pfam
Location: 21182 - 22912 (-)
Gene ID: Rep_389_c_39_15
Type: pfam
Location: 23122 - 24708 (-)
Gene ID: Rep_389_c_39_16
Type: TC
Location: 24738 - 27851 (-)
Gene ID: Rep_389_c_39_17
Type: CAZyme
Location: 27990 - 30578 (-)
Gene ID: Rep_389_c_39_18
Type: CAZyme
Location: 30628 - 32976 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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