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Cluster: Rep_386_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_386_c_63 Rep_386_c_63_5 4911 5930 - 9.B.157.1.1
pfam Rep_386_c_63 Rep_386_c_63_6 6048 7583 - AICARFT_IMPCHas | MGS
TC Rep_386_c_63 Rep_386_c_63_7 7744 9222 + 1.I.1.1.3
pfam Rep_386_c_63 Rep_386_c_63_8 9226 10356 + TGT
TC Rep_386_c_63 Rep_386_c_63_9 10367 11509 + 1.B.42.1.13
pfam Rep_386_c_63 Rep_386_c_63_10 11573 12910 + Voltage_CLC
pfam Rep_386_c_63 Rep_386_c_63_11 13032 13826 + SpoU_methylase
CAZyme Rep_386_c_63 Rep_386_c_63_12 13829 14998 - CE1
TC Rep_386_c_63 Rep_386_c_63_13 15124 17070 + 2.A.72.1.3
Gene ID: Rep_386_c_63_5
Type: TC
Location: 4911 - 5930 (-)
Gene ID: Rep_386_c_63_6
Type: pfam
Location: 6048 - 7583 (-)
Gene ID: Rep_386_c_63_7
Type: TC
Location: 7744 - 9222 (+)
Gene ID: Rep_386_c_63_8
Type: pfam
Location: 9226 - 10356 (+)
Gene ID: Rep_386_c_63_9
Type: TC
Location: 10367 - 11509 (+)
Gene ID: Rep_386_c_63_10
Type: pfam
Location: 11573 - 12910 (+)
Gene ID: Rep_386_c_63_11
Type: pfam
Location: 13032 - 13826 (+)
Gene ID: Rep_386_c_63_12
Type: CAZyme
Location: 13829 - 14998 (-)
Gene ID: Rep_386_c_63_13
Type: TC
Location: 15124 - 17070 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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