dbCAN Logo

Cluster: Rep_386_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_386_c_51 Rep_386_c_51_7 8952 9521 - 2.A.51.1.6
TC Rep_386_c_51 Rep_386_c_51_8 9518 10156 - 2.A.51.1.5
STP Rep_386_c_51 Rep_386_c_51_9 10466 12028 + HATPase_c | HisKA
TF Rep_386_c_51 Rep_386_c_51_10 12118 12825 + Trans_reg_C
CAZyme Rep_386_c_51 Rep_386_c_51_11 12954 14381 + GH13_28
TC Rep_386_c_51 Rep_386_c_51_12 14539 15951 + 9.B.126.2.2
Gene ID: Rep_386_c_51_7
Type: TC
Location: 8952 - 9521 (-)
Gene ID: Rep_386_c_51_8
Type: TC
Location: 9518 - 10156 (-)
Gene ID: Rep_386_c_51_9
Type: STP
Location: 10466 - 12028 (+)
Gene ID: Rep_386_c_51_10
Type: TF
Location: 12118 - 12825 (+)
Gene ID: Rep_386_c_51_11
Type: CAZyme
Location: 12954 - 14381 (+)
Gene ID: Rep_386_c_51_12
Type: TC
Location: 14539 - 15951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List