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Cluster: Rep_386_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_386_c_27 Rep_386_c_27_20 20946 22058 + GT4
NULL(UNKNOWN) Rep_386_c_27 Rep_386_c_27_21 22306 23652 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_386_c_27 Rep_386_c_27_22 23665 24666 + GT2
pfam Rep_386_c_27 Rep_386_c_27_23 24694 25110 + CTP_transf_like
pfam Rep_386_c_27 Rep_386_c_27_24 25179 26282 + FrhB_FdhB_C
CAZyme Rep_386_c_27 Rep_386_c_27_25 26284 27276 + GT2
pfam Rep_386_c_27 Rep_386_c_27_26 27299 28183 + LicD
TC Rep_386_c_27 Rep_386_c_27_27 28180 29682 + 4.C.1.1.4
Gene ID: Rep_386_c_27_20
Type: CAZyme
Location: 20946 - 22058 (+)
Gene ID: Rep_386_c_27_21
Type:
Location: 22306 - 23652 (+)
Gene ID: Rep_386_c_27_22
Type: CAZyme
Location: 23665 - 24666 (+)
Gene ID: Rep_386_c_27_23
Type: pfam
Location: 24694 - 25110 (+)
Gene ID: Rep_386_c_27_24
Type: pfam
Location: 25179 - 26282 (+)
Gene ID: Rep_386_c_27_25
Type: CAZyme
Location: 26284 - 27276 (+)
Gene ID: Rep_386_c_27_26
Type: pfam
Location: 27299 - 28183 (+)
Gene ID: Rep_386_c_27_27
Type: TC
Location: 28180 - 29682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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