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Cluster: Rep_386_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_386_c_20 Rep_386_c_20_6 9161 12502 + GH32
CAZyme Rep_386_c_20 Rep_386_c_20_7 12684 15068 + GH32
pfam Rep_386_c_20 Rep_386_c_20_8 15171 15632 + Tyr_Deacylase
pfam Rep_386_c_20 Rep_386_c_20_9 15725 16183 - DUF5606 | DUF6852
TC Rep_386_c_20 Rep_386_c_20_10 16203 17396 - 3.A.5.9.1
TC Rep_386_c_20 Rep_386_c_20_11 17446 18117 - 3.A.8.1.1
Gene ID: Rep_386_c_20_6
Type: CAZyme
Location: 9161 - 12502 (+)
Gene ID: Rep_386_c_20_7
Type: CAZyme
Location: 12684 - 15068 (+)
Gene ID: Rep_386_c_20_8
Type: pfam
Location: 15171 - 15632 (+)
Gene ID: Rep_386_c_20_9
Type: pfam
Location: 15725 - 16183 (-)
Gene ID: Rep_386_c_20_10
Type: TC
Location: 16203 - 17396 (-)
Gene ID: Rep_386_c_20_11
Type: TC
Location: 17446 - 18117 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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