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Cluster: Rep_386_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_386_c_17 Rep_386_c_17_1 1181 3235 - GH97
pfam Rep_386_c_17 Rep_386_c_17_2 3367 5013 - DUF6377
CAZyme Rep_386_c_17 Rep_386_c_17_3 5107 7083 - GH87
NULL(UNKNOWN) Rep_386_c_17 Rep_386_c_17_4 7458 8345 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_386_c_17 Rep_386_c_17_5 8510 11623 + 1.B.14.6.1
Gene ID: Rep_386_c_17_1
Type: CAZyme
Location: 1181 - 3235 (-)
Gene ID: Rep_386_c_17_2
Type: pfam
Location: 3367 - 5013 (-)
Gene ID: Rep_386_c_17_3
Type: CAZyme
Location: 5107 - 7083 (-)
Gene ID: Rep_386_c_17_4
Type:
Location: 7458 - 8345 (+)
Gene ID: Rep_386_c_17_5
Type: TC
Location: 8510 - 11623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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