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Cluster: Rep_386_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_386_c_219 Rep_386_c_219_6 5723 8440 + 4.A.2.1.17
pfam Rep_386_c_219 Rep_386_c_219_7 8642 9508 + Phage_int_SAM_5
TF Rep_386_c_219 Rep_386_c_219_8 9620 10393 + GerE
CAZyme Rep_386_c_219 Rep_386_c_219_9 10474 12204 + GH13_19
Gene ID: Rep_386_c_219_6
Type: TC
Location: 5723 - 8440 (+)
Gene ID: Rep_386_c_219_7
Type: pfam
Location: 8642 - 9508 (+)
Gene ID: Rep_386_c_219_8
Type: TF
Location: 9620 - 10393 (+)
Gene ID: Rep_386_c_219_9
Type: CAZyme
Location: 10474 - 12204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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