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Cluster: Rep_386_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_386_c_84 Rep_386_c_84_3 1693 2394 - 4.F.1.3.2
pfam Rep_386_c_84 Rep_386_c_84_4 2391 2999 - GtrA_DPMS_TM
NULL(UNKNOWN) Rep_386_c_84 Rep_386_c_84_5 2996 3880 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_386_c_84 Rep_386_c_84_6 4177 4980 + 1.B.18.3.3
TC Rep_386_c_84 Rep_386_c_84_7 5039 7378 + 8.A.3.3.4
NULL(UNKNOWN) Rep_386_c_84 Rep_386_c_84_8 7436 8884 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_386_c_84 Rep_386_c_84_9 8903 9949 + GT4
pfam Rep_386_c_84 Rep_386_c_84_10 10077 11747 + Sulfatase
TC Rep_386_c_84 Rep_386_c_84_11 11930 13738 + 4.C.1.1.14
Gene ID: Rep_386_c_84_3
Type: TC
Location: 1693 - 2394 (-)
Gene ID: Rep_386_c_84_4
Type: pfam
Location: 2391 - 2999 (-)
Gene ID: Rep_386_c_84_5
Type:
Location: 2996 - 3880 (-)
Gene ID: Rep_386_c_84_6
Type: TC
Location: 4177 - 4980 (+)
Gene ID: Rep_386_c_84_7
Type: TC
Location: 5039 - 7378 (+)
Gene ID: Rep_386_c_84_8
Type:
Location: 7436 - 8884 (+)
Gene ID: Rep_386_c_84_9
Type: CAZyme
Location: 8903 - 9949 (+)
Gene ID: Rep_386_c_84_10
Type: pfam
Location: 10077 - 11747 (+)
Gene ID: Rep_386_c_84_11
Type: TC
Location: 11930 - 13738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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