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Cluster: Rep_381_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_381_c_0 Rep_381_c_0_2014 2382406 2383071 - 9.B.27.2.2
pfam Rep_381_c_0 Rep_381_c_0_2015 2383122 2384705 - Transglut_core
TC Rep_381_c_0 Rep_381_c_0_2016 2384876 2385649 + 3.A.1.18.3
pfam Rep_381_c_0 Rep_381_c_0_2017 2385646 2386980 + SUFBD_core | SufBD_N
pfam Rep_381_c_0 Rep_381_c_0_2018 2386977 2388215 + Aminotran_5 | DegT_DnrJ_EryC1
CAZyme Rep_381_c_0 Rep_381_c_0_2019 2388305 2388970 + GH25
TC Rep_381_c_0 Rep_381_c_0_2020 2389050 2390759 + 2.A.1.53.5
Gene ID: Rep_381_c_0_2014
Type: TC
Location: 2382406 - 2383071 (-)
Gene ID: Rep_381_c_0_2015
Type: pfam
Location: 2383122 - 2384705 (-)
Gene ID: Rep_381_c_0_2016
Type: TC
Location: 2384876 - 2385649 (+)
Gene ID: Rep_381_c_0_2017
Type: pfam
Location: 2385646 - 2386980 (+)
Gene ID: Rep_381_c_0_2018
Type: pfam
Location: 2386977 - 2388215 (+)
Gene ID: Rep_381_c_0_2019
Type: CAZyme
Location: 2388305 - 2388970 (+)
Gene ID: Rep_381_c_0_2020
Type: TC
Location: 2389050 - 2390759 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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