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Cluster: Rep_381_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_381_c_0 Rep_381_c_0_1830 2174945 2176963 - GH13_14
NULL(UNKNOWN) Rep_381_c_0 Rep_381_c_0_1831 2177000 2177314 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_381_c_0 Rep_381_c_0_1832 2177477 2179093 - 3.A.1.121.4
Gene ID: Rep_381_c_0_1830
Type: CAZyme
Location: 2174945 - 2176963 (-)
Gene ID: Rep_381_c_0_1831
Type:
Location: 2177000 - 2177314 (-)
Gene ID: Rep_381_c_0_1832
Type: TC
Location: 2177477 - 2179093 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_381_c_0_1832 vegan > omnivore 1.07690 0.00566
Rep_381_c_0_1832 vegan > vegetarian 1.03163 0.04515

🧭 Explore Read Mapping of CGC

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