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Cluster: Rep_381_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_381_c_0 Rep_381_c_0_1745 2073856 2076300 + 8.A.3.3.4
CAZyme Rep_381_c_0 Rep_381_c_0_1746 2077281 2078885 + GH30_3
NULL(UNKNOWN) Rep_381_c_0 Rep_381_c_0_1747 2078920 2082765 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_381_c_0 Rep_381_c_0_1748 2083045 2083815 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_381_c_0 Rep_381_c_0_1749 2083815 2085293 + 2.A.50.2.1
pfam Rep_381_c_0 Rep_381_c_0_1750 2085552 2086622 + DEDD_Tnp_IS110 | Transposase_20
TC Rep_381_c_0 Rep_381_c_0_1751 2087213 2088283 - 1.B.42.1.13
pfam Rep_381_c_0 Rep_381_c_0_1752 2088289 2089419 - TGT
NULL(UNKNOWN) Rep_381_c_0 Rep_381_c_0_1753 2090035 2090208 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_381_c_0 Rep_381_c_0_1754 2090216 2091385 - 2.A.23.2.7
Gene ID: Rep_381_c_0_1745
Type: TC
Location: 2073856 - 2076300 (+)
Gene ID: Rep_381_c_0_1746
Type: CAZyme
Location: 2077281 - 2078885 (+)
Gene ID: Rep_381_c_0_1747
Type:
Location: 2078920 - 2082765 (+)
Gene ID: Rep_381_c_0_1748
Type:
Location: 2083045 - 2083815 (+)
Gene ID: Rep_381_c_0_1749
Type: TC
Location: 2083815 - 2085293 (+)
Gene ID: Rep_381_c_0_1750
Type: pfam
Location: 2085552 - 2086622 (+)
Gene ID: Rep_381_c_0_1751
Type: TC
Location: 2087213 - 2088283 (-)
Gene ID: Rep_381_c_0_1752
Type: pfam
Location: 2088289 - 2089419 (-)
Gene ID: Rep_381_c_0_1753
Type:
Location: 2090035 - 2090208 (-)
Gene ID: Rep_381_c_0_1754
Type: TC
Location: 2090216 - 2091385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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