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Cluster: Rep_381_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_381_c_0 Rep_381_c_0_1474 1752672 1753823 + 3.A.1.13.2
TC Rep_381_c_0 Rep_381_c_0_1475 1753820 1754818 + 3.A.1.13.2
TC Rep_381_c_0 Rep_381_c_0_1476 1754815 1755540 + 3.A.1.13.2
pfam Rep_381_c_0 Rep_381_c_0_1477 1755537 1756091 + DUF2284
TC Rep_381_c_0 Rep_381_c_0_1478 1756157 1758370 + 1.B.14.8.7
NULL(UNKNOWN) Rep_381_c_0 Rep_381_c_0_1479 1758399 1759331 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_381_c_0 Rep_381_c_0_1480 1759524 1760342 + DUF5683
CAZyme Rep_381_c_0 Rep_381_c_0_1481 1760382 1762391 + GH23
Gene ID: Rep_381_c_0_1474
Type: TC
Location: 1752672 - 1753823 (+)
Gene ID: Rep_381_c_0_1475
Type: TC
Location: 1753820 - 1754818 (+)
Gene ID: Rep_381_c_0_1476
Type: TC
Location: 1754815 - 1755540 (+)
Gene ID: Rep_381_c_0_1477
Type: pfam
Location: 1755537 - 1756091 (+)
Gene ID: Rep_381_c_0_1478
Type: TC
Location: 1756157 - 1758370 (+)
Gene ID: Rep_381_c_0_1479
Type:
Location: 1758399 - 1759331 (+)
Gene ID: Rep_381_c_0_1480
Type: pfam
Location: 1759524 - 1760342 (+)
Gene ID: Rep_381_c_0_1481
Type: CAZyme
Location: 1760382 - 1762391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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