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Cluster: Rep_381_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_381_c_0 Rep_381_c_0_981 1154430 1155080 - 2.A.115.2.14
TF Rep_381_c_0 Rep_381_c_0_982 1155082 1157979 - GerE
TC Rep_381_c_0 Rep_381_c_0_983 1158601 1161738 + 1.B.14.6.1
TC Rep_381_c_0 Rep_381_c_0_984 1161764 1163359 + 8.A.46.1.5
NULL(UNKNOWN) Rep_381_c_0 Rep_381_c_0_985 1163490 1164353 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_381_c_0 Rep_381_c_0_986 1164699 1166375 + GH16_3
CAZyme Rep_381_c_0 Rep_381_c_0_987 1166415 1167302 + GH16_3
CAZyme Rep_381_c_0 Rep_381_c_0_988 1167299 1169524 + GH3
CAZyme Rep_381_c_0 Rep_381_c_0_989 1169541 1170935 + GH128
Gene ID: Rep_381_c_0_981
Type: TC
Location: 1154430 - 1155080 (-)
Gene ID: Rep_381_c_0_982
Type: TF
Location: 1155082 - 1157979 (-)
Gene ID: Rep_381_c_0_983
Type: TC
Location: 1158601 - 1161738 (+)
Gene ID: Rep_381_c_0_984
Type: TC
Location: 1161764 - 1163359 (+)
Gene ID: Rep_381_c_0_985
Type:
Location: 1163490 - 1164353 (+)
Gene ID: Rep_381_c_0_986
Type: CAZyme
Location: 1164699 - 1166375 (+)
Gene ID: Rep_381_c_0_987
Type: CAZyme
Location: 1166415 - 1167302 (+)
Gene ID: Rep_381_c_0_988
Type: CAZyme
Location: 1167299 - 1169524 (+)
Gene ID: Rep_381_c_0_989
Type: CAZyme
Location: 1169541 - 1170935 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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