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Cluster: Rep_381_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_381_c_0 Rep_381_c_0_764 885551 888517 + 1.B.14.6.1
TC Rep_381_c_0 Rep_381_c_0_765 888539 890047 + 8.A.46.1.2
CAZyme Rep_381_c_0 Rep_381_c_0_766 890069 891556 + GH30_3
pfam Rep_381_c_0 Rep_381_c_0_767 891583 892902 + DUF5016 | DUF5125 | DUF5121
CAZyme Rep_381_c_0 Rep_381_c_0_768 892918 895152 + GH3
Gene ID: Rep_381_c_0_764
Type: TC
Location: 885551 - 888517 (+)
Gene ID: Rep_381_c_0_765
Type: TC
Location: 888539 - 890047 (+)
Gene ID: Rep_381_c_0_766
Type: CAZyme
Location: 890069 - 891556 (+)
Gene ID: Rep_381_c_0_767
Type: pfam
Location: 891583 - 892902 (+)
Gene ID: Rep_381_c_0_768
Type: CAZyme
Location: 892918 - 895152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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