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Cluster: Rep_377_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_377_c_9 Rep_377_c_9_8 7007 8800 + GH31
pfam Rep_377_c_9 Rep_377_c_9_9 8864 10018 + Smr | DUF2027
pfam Rep_377_c_9 Rep_377_c_9_10 10015 10806 + Flavodoxin_5 | Fer4_9
CAZyme Rep_377_c_9 Rep_377_c_9_11 11002 12954 + GH133
CAZyme Rep_377_c_9 Rep_377_c_9_12 13011 14267 + GT4
CAZyme Rep_377_c_9 Rep_377_c_9_13 14294 15679 + GH57
TC Rep_377_c_9 Rep_377_c_9_14 15697 16371 + 2.A.115.2.14
Gene ID: Rep_377_c_9_8
Type: CAZyme
Location: 7007 - 8800 (+)
Gene ID: Rep_377_c_9_9
Type: pfam
Location: 8864 - 10018 (+)
Gene ID: Rep_377_c_9_10
Type: pfam
Location: 10015 - 10806 (+)
Gene ID: Rep_377_c_9_11
Type: CAZyme
Location: 11002 - 12954 (+)
Gene ID: Rep_377_c_9_12
Type: CAZyme
Location: 13011 - 14267 (+)
Gene ID: Rep_377_c_9_13
Type: CAZyme
Location: 14294 - 15679 (+)
Gene ID: Rep_377_c_9_14
Type: TC
Location: 15697 - 16371 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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