Cluster: Rep_377_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: pectin/galactan
- Genome ID: Rep_377
- CGC Family ID: CGCFAM_00031
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_377_c_51 | Rep_377_c_51_1 | 1 | 2994 | + | 1.B.14.6.1 |
| TC | Rep_377_c_51 | Rep_377_c_51_2 | 3024 | 4562 | + | 8.A.46.1.1 |
| pfam | Rep_377_c_51 | Rep_377_c_51_3 | 4565 | 5653 | + | SusE |
| CAZyme | Rep_377_c_51 | Rep_377_c_51_4 | 5727 | 6788 | + | GH53 |
| CAZyme | Rep_377_c_51 | Rep_377_c_51_5 | 6785 | 9223 | + | GH2 |
| pfam | Rep_377_c_51 | Rep_377_c_51_6 | 9435 | 10028 | - | UPF0029 |
| pfam | Rep_377_c_51 | Rep_377_c_51_7 | 10086 | 11228 | - | Cyt_bd_oxida_II |
| TC | Rep_377_c_51 | Rep_377_c_51_8 | 11231 | 12793 | - | 3.D.4.3.2 |
Gene ID: Rep_377_c_51_1
Type: TC
Location: 1 - 2994 (+)
Type: TC
Location: 1 - 2994 (+)
Gene ID: Rep_377_c_51_2
Type: TC
Location: 3024 - 4562 (+)
Type: TC
Location: 3024 - 4562 (+)
Gene ID: Rep_377_c_51_3
Type: pfam
Location: 4565 - 5653 (+)
Type: pfam
Location: 4565 - 5653 (+)
Gene ID: Rep_377_c_51_4
Type: CAZyme
Location: 5727 - 6788 (+)
Type: CAZyme
Location: 5727 - 6788 (+)
Gene ID: Rep_377_c_51_5
Type: CAZyme
Location: 6785 - 9223 (+)
Type: CAZyme
Location: 6785 - 9223 (+)
Gene ID: Rep_377_c_51_6
Type: pfam
Location: 9435 - 10028 (-)
Type: pfam
Location: 9435 - 10028 (-)
Gene ID: Rep_377_c_51_7
Type: pfam
Location: 10086 - 11228 (-)
Type: pfam
Location: 10086 - 11228 (-)
Gene ID: Rep_377_c_51_8
Type: TC
Location: 11231 - 12793 (-)
Type: TC
Location: 11231 - 12793 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp902475285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.