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Cluster: Rep_377_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_377_c_47 Rep_377_c_47_1 147 3092 + GH13_42
pfam Rep_377_c_47 Rep_377_c_47_2 3449 5101 + DUF6377
TC Rep_377_c_47 Rep_377_c_47_3 5289 8255 + 1.B.14.6.1
pfam Rep_377_c_47 Rep_377_c_47_4 8274 10070 + SusD_RagB
pfam Rep_377_c_47 Rep_377_c_47_5 10083 11552 + CBM26
CAZyme Rep_377_c_47 Rep_377_c_47_6 11559 12896 + GH13
CAZyme Rep_377_c_47 Rep_377_c_47_7 12902 15004 + GH97
Gene ID: Rep_377_c_47_1
Type: CAZyme
Location: 147 - 3092 (+)
Gene ID: Rep_377_c_47_2
Type: pfam
Location: 3449 - 5101 (+)
Gene ID: Rep_377_c_47_3
Type: TC
Location: 5289 - 8255 (+)
Gene ID: Rep_377_c_47_4
Type: pfam
Location: 8274 - 10070 (+)
Gene ID: Rep_377_c_47_5
Type: pfam
Location: 10083 - 11552 (+)
Gene ID: Rep_377_c_47_6
Type: CAZyme
Location: 11559 - 12896 (+)
Gene ID: Rep_377_c_47_7
Type: CAZyme
Location: 12902 - 15004 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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