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Cluster: Rep_377_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_377_c_46 Rep_377_c_46_1 161 1984 + GH32
TC Rep_377_c_46 Rep_377_c_46_2 1998 3173 + 2.A.1.7.17
STP Rep_377_c_46 Rep_377_c_46_3 3177 4055 + PfkB
TC Rep_377_c_46 Rep_377_c_46_4 4188 7283 + 1.B.14.6.1
pfam Rep_377_c_46 Rep_377_c_46_5 7297 9027 + SusD_RagB | SusD-like_3
pfam Rep_377_c_46 Rep_377_c_46_6 9041 10414 + DUF4960
CAZyme Rep_377_c_46 Rep_377_c_46_7 10426 11949 + GH32
NULL(UNKNOWN) Rep_377_c_46 Rep_377_c_46_8 11955 12899 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_377_c_46 Rep_377_c_46_9 12994 14220 - Arf | Ras | MMR_HSR1 | GTP-bdg_N | GTP-bdg_M
TC Rep_377_c_46 Rep_377_c_46_10 14222 16033 - 4.C.1.1.14
Gene ID: Rep_377_c_46_1
Type: CAZyme
Location: 161 - 1984 (+)
Gene ID: Rep_377_c_46_2
Type: TC
Location: 1998 - 3173 (+)
Gene ID: Rep_377_c_46_3
Type: STP
Location: 3177 - 4055 (+)
Gene ID: Rep_377_c_46_4
Type: TC
Location: 4188 - 7283 (+)
Gene ID: Rep_377_c_46_5
Type: pfam
Location: 7297 - 9027 (+)
Gene ID: Rep_377_c_46_6
Type: pfam
Location: 9041 - 10414 (+)
Gene ID: Rep_377_c_46_7
Type: CAZyme
Location: 10426 - 11949 (+)
Gene ID: Rep_377_c_46_8
Type:
Location: 11955 - 12899 (+)
Gene ID: Rep_377_c_46_9
Type: pfam
Location: 12994 - 14220 (-)
Gene ID: Rep_377_c_46_10
Type: TC
Location: 14222 - 16033 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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