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Cluster: Rep_376_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_376_c_33 Rep_376_c_33_11 9652 11361 + GT3
CAZyme Rep_376_c_33 Rep_376_c_33_12 11406 13964 + GT35
NULL(UNKNOWN) Rep_376_c_33 Rep_376_c_33_13 14096 14989 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_376_c_33 Rep_376_c_33_14 15029 15490 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme Rep_376_c_33 Rep_376_c_33_15 15502 17076 - GH5_4
CAZyme Rep_376_c_33 Rep_376_c_33_16 17251 20106 + GH31_4
TC Rep_376_c_33 Rep_376_c_33_17 20131 20826 - 2.A.122.1.7
TC Rep_376_c_33 Rep_376_c_33_18 20841 21224 - 1.E.14.1.13
Gene ID: Rep_376_c_33_11
Type: CAZyme
Location: 9652 - 11361 (+)
Gene ID: Rep_376_c_33_12
Type: CAZyme
Location: 11406 - 13964 (+)
Gene ID: Rep_376_c_33_13
Type:
Location: 14096 - 14989 (+)
Gene ID: Rep_376_c_33_14
Type: pfam
Location: 15029 - 15490 (-)
Gene ID: Rep_376_c_33_15
Type: CAZyme
Location: 15502 - 17076 (-)
Gene ID: Rep_376_c_33_16
Type: CAZyme
Location: 17251 - 20106 (+)
Gene ID: Rep_376_c_33_17
Type: TC
Location: 20131 - 20826 (-)
Gene ID: Rep_376_c_33_18
Type: TC
Location: 20841 - 21224 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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