dbCAN Logo

Cluster: Rep_376_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_376_c_108 Rep_376_c_108_2 3273 4712 - GH128
CAZyme Rep_376_c_108 Rep_376_c_108_3 4712 5875 - GH16_3
NULL(UNKNOWN) Rep_376_c_108 Rep_376_c_108_4 6068 6991 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_376_c_108 Rep_376_c_108_5 7081 8676 - 8.A.46.1.5
TC Rep_376_c_108 Rep_376_c_108_6 8692 11823 - 1.B.14.6.1
TF Rep_376_c_108 Rep_376_c_108_7 12148 15039 + GerE
pfam Rep_376_c_108 Rep_376_c_108_8 15109 16797 + DUF6377
TC Rep_376_c_108 Rep_376_c_108_9 16982 18931 + 1.B.14.6.1
Gene ID: Rep_376_c_108_2
Type: CAZyme
Location: 3273 - 4712 (-)
Gene ID: Rep_376_c_108_3
Type: CAZyme
Location: 4712 - 5875 (-)
Gene ID: Rep_376_c_108_4
Type:
Location: 6068 - 6991 (-)
Gene ID: Rep_376_c_108_5
Type: TC
Location: 7081 - 8676 (-)
Gene ID: Rep_376_c_108_6
Type: TC
Location: 8692 - 11823 (-)
Gene ID: Rep_376_c_108_7
Type: TF
Location: 12148 - 15039 (+)
Gene ID: Rep_376_c_108_8
Type: pfam
Location: 15109 - 16797 (+)
Gene ID: Rep_376_c_108_9
Type: TC
Location: 16982 - 18931 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List