Cluster: Rep_376_CGC12
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_376
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_376_c_106 | Rep_376_c_106_6 | 5236 | 5958 | + | 9.B.20.1.4 |
| TC | Rep_376_c_106 | Rep_376_c_106_7 | 5970 | 8174 | + | 2.A.37.5.2 |
| pfam | Rep_376_c_106 | Rep_376_c_106_8 | 8195 | 9355 | + | AIRS | AIRS_C |
| CAZyme | Rep_376_c_106 | Rep_376_c_106_9 | 9399 | 10817 | + | GH23 |
| pfam | Rep_376_c_106 | Rep_376_c_106_10 | 10878 | 11435 | + | DUF3332 |
| TC | Rep_376_c_106 | Rep_376_c_106_11 | 11524 | 12114 | - | 9.B.18.1.2 |
| STP | Rep_376_c_106 | Rep_376_c_106_12 | 12111 | 13322 | - | Aminotran_1_2 |
| CAZyme | Rep_376_c_106 | Rep_376_c_106_13 | 13338 | 14339 | - | GT2 |
| pfam | Rep_376_c_106 | Rep_376_c_106_14 | 14346 | 15635 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | Rep_376_c_106 | Rep_376_c_106_15 | 15692 | 16732 | - | GT4 |
| pfam | Rep_376_c_106 | Rep_376_c_106_16 | 16716 | 17252 | - | Hexapep | Hexapep_2 |
| CAZyme | Rep_376_c_106 | Rep_376_c_106_17 | 17249 | 18337 | - | GT4 |
| pfam | Rep_376_c_106 | Rep_376_c_106_18 | 18334 | 19524 | - | Wzy_C |
| TC | Rep_376_c_106 | Rep_376_c_106_19 | 19535 | 20764 | - | 2.A.66.2.10 |
Gene ID: Rep_376_c_106_6
Type: TC
Location: 5236 - 5958 (+)
Type: TC
Location: 5236 - 5958 (+)
Gene ID: Rep_376_c_106_7
Type: TC
Location: 5970 - 8174 (+)
Type: TC
Location: 5970 - 8174 (+)
Gene ID: Rep_376_c_106_8
Type: pfam
Location: 8195 - 9355 (+)
Type: pfam
Location: 8195 - 9355 (+)
Gene ID: Rep_376_c_106_9
Type: CAZyme
Location: 9399 - 10817 (+)
Type: CAZyme
Location: 9399 - 10817 (+)
Gene ID: Rep_376_c_106_10
Type: pfam
Location: 10878 - 11435 (+)
Type: pfam
Location: 10878 - 11435 (+)
Gene ID: Rep_376_c_106_11
Type: TC
Location: 11524 - 12114 (-)
Type: TC
Location: 11524 - 12114 (-)
Gene ID: Rep_376_c_106_12
Type: STP
Location: 12111 - 13322 (-)
Type: STP
Location: 12111 - 13322 (-)
Gene ID: Rep_376_c_106_13
Type: CAZyme
Location: 13338 - 14339 (-)
Type: CAZyme
Location: 13338 - 14339 (-)
Gene ID: Rep_376_c_106_14
Type: pfam
Location: 14346 - 15635 (-)
Type: pfam
Location: 14346 - 15635 (-)
Gene ID: Rep_376_c_106_15
Type: CAZyme
Location: 15692 - 16732 (-)
Type: CAZyme
Location: 15692 - 16732 (-)
Gene ID: Rep_376_c_106_16
Type: pfam
Location: 16716 - 17252 (-)
Type: pfam
Location: 16716 - 17252 (-)
Gene ID: Rep_376_c_106_17
Type: CAZyme
Location: 17249 - 18337 (-)
Type: CAZyme
Location: 17249 - 18337 (-)
Gene ID: Rep_376_c_106_18
Type: pfam
Location: 18334 - 19524 (-)
Type: pfam
Location: 18334 - 19524 (-)
Gene ID: Rep_376_c_106_19
Type: TC
Location: 19535 - 20764 (-)
Type: TC
Location: 19535 - 20764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp029059965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.