Cluster: Rep_373_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_373
- CGC Family ID: CGCFAM_03919
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_373_c_56 | Rep_373_c_56_4 | 2348 | 4192 | + | 3.B.1.1.6 |
| pfam | Rep_373_c_56 | Rep_373_c_56_5 | 4352 | 5536 | + | HlyD_3 | HlyD_D23 |
| TC | Rep_373_c_56 | Rep_373_c_56_6 | 5552 | 8647 | + | 2.A.6.1.7 |
| pfam | Rep_373_c_56 | Rep_373_c_56_7 | 8640 | 9800 | + | OEP | OEP |
| CAZyme | Rep_373_c_56 | Rep_373_c_56_8 | 9965 | 11401 | - | GH13_28 |
Gene ID: Rep_373_c_56_4
Type: TC
Location: 2348 - 4192 (+)
Type: TC
Location: 2348 - 4192 (+)
Gene ID: Rep_373_c_56_5
Type: pfam
Location: 4352 - 5536 (+)
Type: pfam
Location: 4352 - 5536 (+)
Gene ID: Rep_373_c_56_6
Type: TC
Location: 5552 - 8647 (+)
Type: TC
Location: 5552 - 8647 (+)
Gene ID: Rep_373_c_56_7
Type: pfam
Location: 8640 - 9800 (+)
Type: pfam
Location: 8640 - 9800 (+)
Gene ID: Rep_373_c_56_8
Type: CAZyme
Location: 9965 - 11401 (-)
Type: CAZyme
Location: 9965 - 11401 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.