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Cluster: Rep_371_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_371_c_122 Rep_371_c_122_4 5308 7008 - 1.B.14.6.1
TC Rep_371_c_122 Rep_371_c_122_5 7005 8510 - 1.B.14.6.1
CAZyme Rep_371_c_122 Rep_371_c_122_6 8673 10025 - GH5_7
CAZyme Rep_371_c_122 Rep_371_c_122_7 10154 11593 - CE20
TF Rep_371_c_122 Rep_371_c_122_8 11704 12585 - HTH_AraC | HTH_AraC
CAZyme Rep_371_c_122 Rep_371_c_122_9 12729 14930 + GH36
NULL(UNKNOWN) Rep_371_c_122 Rep_371_c_122_10 15011 16279 - NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_371_c_122 Rep_371_c_122_11 16461 20501 - HTH_AraC
TC Rep_371_c_122 Rep_371_c_122_12 20749 23919 + 1.B.14.6.1
TC Rep_371_c_122 Rep_371_c_122_13 23926 25590 + 8.A.46.1.3
sulfatase Rep_371_c_122 Rep_371_c_122_14 25594 26955 + S1_9
CAZyme Rep_371_c_122 Rep_371_c_122_15 27071 29638 + PL15_2
Gene ID: Rep_371_c_122_4
Type: TC
Location: 5308 - 7008 (-)
Gene ID: Rep_371_c_122_5
Type: TC
Location: 7005 - 8510 (-)
Gene ID: Rep_371_c_122_6
Type: CAZyme
Location: 8673 - 10025 (-)
Gene ID: Rep_371_c_122_7
Type: CAZyme
Location: 10154 - 11593 (-)
Gene ID: Rep_371_c_122_8
Type: TF
Location: 11704 - 12585 (-)
Gene ID: Rep_371_c_122_9
Type: CAZyme
Location: 12729 - 14930 (+)
Gene ID: Rep_371_c_122_10
Type:
Location: 15011 - 16279 (-)
Gene ID: Rep_371_c_122_11
Type: TF
Location: 16461 - 20501 (-)
Gene ID: Rep_371_c_122_12
Type: TC
Location: 20749 - 23919 (+)
Gene ID: Rep_371_c_122_13
Type: TC
Location: 23926 - 25590 (+)
Gene ID: Rep_371_c_122_14
Type: sulfatase
Location: 25594 - 26955 (+)
Gene ID: Rep_371_c_122_15
Type: CAZyme
Location: 27071 - 29638 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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