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Cluster: Rep_371_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_371_c_110 Rep_371_c_110_7 6844 8754 - GH67
CAZyme Rep_371_c_110 Rep_371_c_110_8 8911 9891 - GH43_1
CAZyme Rep_371_c_110 Rep_371_c_110_9 9891 11003 - GH10
TC Rep_371_c_110 Rep_371_c_110_10 11043 12479 - 2.A.2.3.2
CAZyme Rep_371_c_110 Rep_371_c_110_11 12479 14119 - CE20 | CE20
CAZyme Rep_371_c_110 Rep_371_c_110_12 14145 15836 - GH35
CAZyme Rep_371_c_110 Rep_371_c_110_13 15987 18365 - GH10
pfam Rep_371_c_110 Rep_371_c_110_14 18489 19892 - SGBP_B_XBD
pfam Rep_371_c_110 Rep_371_c_110_15 19913 21610 - SusD_RagB | SusD-like_3
TC Rep_371_c_110 Rep_371_c_110_16 21626 24775 - 1.B.14.6.1
TF Rep_371_c_110 Rep_371_c_110_17 25143 29192 + HTH_AraC
CAZyme Rep_371_c_110 Rep_371_c_110_18 29227 30291 - GH43_19
Gene ID: Rep_371_c_110_7
Type: CAZyme
Location: 6844 - 8754 (-)
Gene ID: Rep_371_c_110_8
Type: CAZyme
Location: 8911 - 9891 (-)
Gene ID: Rep_371_c_110_9
Type: CAZyme
Location: 9891 - 11003 (-)
Gene ID: Rep_371_c_110_10
Type: TC
Location: 11043 - 12479 (-)
Gene ID: Rep_371_c_110_11
Type: CAZyme
Location: 12479 - 14119 (-)
Gene ID: Rep_371_c_110_12
Type: CAZyme
Location: 14145 - 15836 (-)
Gene ID: Rep_371_c_110_13
Type: CAZyme
Location: 15987 - 18365 (-)
Gene ID: Rep_371_c_110_14
Type: pfam
Location: 18489 - 19892 (-)
Gene ID: Rep_371_c_110_15
Type: pfam
Location: 19913 - 21610 (-)
Gene ID: Rep_371_c_110_16
Type: TC
Location: 21626 - 24775 (-)
Gene ID: Rep_371_c_110_17
Type: TF
Location: 25143 - 29192 (+)
Gene ID: Rep_371_c_110_18
Type: CAZyme
Location: 29227 - 30291 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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