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Cluster: Rep_371_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_371_c_48 Rep_371_c_48_26 37282 38658 + 9.B.18.1.3
TC Rep_371_c_48 Rep_371_c_48_27 38655 40460 + 2.A.49.6.4
peptidase Rep_371_c_48 Rep_371_c_48_28 40543 43374 + M16.UPB
CAZyme Rep_371_c_48 Rep_371_c_48_29 43490 45844 + GH3
pfam Rep_371_c_48 Rep_371_c_48_30 46017 46535 + PepSY_like
TC Rep_371_c_48 Rep_371_c_48_31 47155 48663 + 2.A.35.1.1
Gene ID: Rep_371_c_48_26
Type: TC
Location: 37282 - 38658 (+)
Gene ID: Rep_371_c_48_27
Type: TC
Location: 38655 - 40460 (+)
Gene ID: Rep_371_c_48_28
Type: peptidase
Location: 40543 - 43374 (+)
Gene ID: Rep_371_c_48_29
Type: CAZyme
Location: 43490 - 45844 (+)
Gene ID: Rep_371_c_48_30
Type: pfam
Location: 46017 - 46535 (+)
Gene ID: Rep_371_c_48_31
Type: TC
Location: 47155 - 48663 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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