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Cluster: Rep_357_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_357_c_18 Rep_357_c_18_12 15043 17328 - GH92
NULL(UNKNOWN) Rep_357_c_18 Rep_357_c_18_13 17423 18505 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_357_c_18 Rep_357_c_18_14 18507 20150 - GH29
NULL(UNKNOWN) Rep_357_c_18 Rep_357_c_18_15 20355 21365 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_357_c_18 Rep_357_c_18_16 21378 23405 + 3.D.10.1.5
TC Rep_357_c_18 Rep_357_c_18_17 23478 24233 + 3.D.10.1.5
TC Rep_357_c_18 Rep_357_c_18_18 24363 26102 + 2.A.53.3.9
Gene ID: Rep_357_c_18_12
Type: CAZyme
Location: 15043 - 17328 (-)
Gene ID: Rep_357_c_18_13
Type:
Location: 17423 - 18505 (+)
Gene ID: Rep_357_c_18_14
Type: CAZyme
Location: 18507 - 20150 (-)
Gene ID: Rep_357_c_18_15
Type:
Location: 20355 - 21365 (+)
Gene ID: Rep_357_c_18_16
Type: TC
Location: 21378 - 23405 (+)
Gene ID: Rep_357_c_18_17
Type: TC
Location: 23478 - 24233 (+)
Gene ID: Rep_357_c_18_18
Type: TC
Location: 24363 - 26102 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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