Cluster: Rep_357_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_357
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_357_c_14 | Rep_357_c_14_4 | 1861 | 4437 | + | 3.A.9.1.2 |
| CAZyme | Rep_357_c_14 | Rep_357_c_14_5 | 4518 | 6410 | - | GH43_4 |
| pfam | Rep_357_c_14 | Rep_357_c_14_6 | 6460 | 8244 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_357_c_14 | Rep_357_c_14_7 | 8260 | 11493 | - | 1.B.14.6.1 |
| pfam | Rep_357_c_14 | Rep_357_c_14_8 | 11523 | 13289 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_357_c_14 | Rep_357_c_14_9 | 13305 | 16430 | - | 1.B.14.6.1 |
Gene ID: Rep_357_c_14_4
Type: TC
Location: 1861 - 4437 (+)
Type: TC
Location: 1861 - 4437 (+)
Gene ID: Rep_357_c_14_5
Type: CAZyme
Location: 4518 - 6410 (-)
Type: CAZyme
Location: 4518 - 6410 (-)
Gene ID: Rep_357_c_14_6
Type: pfam
Location: 6460 - 8244 (-)
Type: pfam
Location: 6460 - 8244 (-)
Gene ID: Rep_357_c_14_7
Type: TC
Location: 8260 - 11493 (-)
Type: TC
Location: 8260 - 11493 (-)
Gene ID: Rep_357_c_14_8
Type: pfam
Location: 11523 - 13289 (-)
Type: pfam
Location: 11523 - 13289 (-)
Gene ID: Rep_357_c_14_9
Type: TC
Location: 13305 - 16430 (-)
Type: TC
Location: 13305 - 16430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp905202215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.