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Cluster: Rep_357_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_357_c_7 Rep_357_c_7_2 1195 2013 + GT2
CAZyme Rep_357_c_7 Rep_357_c_7_3 1990 2925 - GT2
pfam Rep_357_c_7 Rep_357_c_7_4 2930 4378 - GHL10
TC Rep_357_c_7 Rep_357_c_7_5 4369 5772 - 2.A.25.1.5
TC Rep_357_c_7 Rep_357_c_7_6 5769 6524 - 3.A.1.13.2
TC Rep_357_c_7 Rep_357_c_7_7 6521 7537 - 3.A.1.13.2
TC Rep_357_c_7 Rep_357_c_7_8 7534 8685 - 3.A.1.13.2
TC Rep_357_c_7 Rep_357_c_7_9 8685 9179 - 9.B.124.1.6
pfam Rep_357_c_7 Rep_357_c_7_10 9256 9867 - DUF179
NULL(UNKNOWN) Rep_357_c_7 Rep_357_c_7_11 10343 11197 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_357_c_7 Rep_357_c_7_12 11469 11849 + 3.D.1.8.1
TC Rep_357_c_7 Rep_357_c_7_13 11840 12448 + 3.D.1.6.1
TC Rep_357_c_7 Rep_357_c_7_14 12471 14102 + 3.D.1.5.1
TC Rep_357_c_7 Rep_357_c_7_15 14146 15222 + 3.D.1.5.1
TC Rep_357_c_7 Rep_357_c_7_16 15259 16761 + 3.A.2.1.7
pfam Rep_357_c_7 Rep_357_c_7_17 16782 17018 + ATP-synt_DE_N
TC Rep_357_c_7 Rep_357_c_7_18 17025 18161 + 3.A.2.1.7
TC Rep_357_c_7 Rep_357_c_7_19 18207 18446 + 3.A.2.1.6
pfam Rep_357_c_7 Rep_357_c_7_20 18468 18965 + ATP-synt_B
pfam Rep_357_c_7 Rep_357_c_7_21 18971 19522 + OSCP
TC Rep_357_c_7 Rep_357_c_7_22 19577 21148 + 3.A.2.1.3
TC Rep_357_c_7 Rep_357_c_7_23 21159 22043 + 3.A.2.1.6
STP Rep_357_c_7 Rep_357_c_7_24 22098 22697 + Fer4 | Fer4
pfam Rep_357_c_7 Rep_357_c_7_25 22739 23251 + Oxidored_q3
TC Rep_357_c_7 Rep_357_c_7_26 23258 23569 + 3.D.1.8.1
TC Rep_357_c_7 Rep_357_c_7_27 23575 25584 + 3.D.1.2.1
TC Rep_357_c_7 Rep_357_c_7_28 25628 27154 + 3.D.1.5.1
TC Rep_357_c_7 Rep_357_c_7_29 27178 28656 + 3.D.9.1.1
Gene ID: Rep_357_c_7_2
Type: CAZyme
Location: 1195 - 2013 (+)
Gene ID: Rep_357_c_7_3
Type: CAZyme
Location: 1990 - 2925 (-)
Gene ID: Rep_357_c_7_4
Type: pfam
Location: 2930 - 4378 (-)
Gene ID: Rep_357_c_7_5
Type: TC
Location: 4369 - 5772 (-)
Gene ID: Rep_357_c_7_6
Type: TC
Location: 5769 - 6524 (-)
Gene ID: Rep_357_c_7_7
Type: TC
Location: 6521 - 7537 (-)
Gene ID: Rep_357_c_7_8
Type: TC
Location: 7534 - 8685 (-)
Gene ID: Rep_357_c_7_9
Type: TC
Location: 8685 - 9179 (-)
Gene ID: Rep_357_c_7_10
Type: pfam
Location: 9256 - 9867 (-)
Gene ID: Rep_357_c_7_11
Type:
Location: 10343 - 11197 (+)
Gene ID: Rep_357_c_7_12
Type: TC
Location: 11469 - 11849 (+)
Gene ID: Rep_357_c_7_13
Type: TC
Location: 11840 - 12448 (+)
Gene ID: Rep_357_c_7_14
Type: TC
Location: 12471 - 14102 (+)
Gene ID: Rep_357_c_7_15
Type: TC
Location: 14146 - 15222 (+)
Gene ID: Rep_357_c_7_16
Type: TC
Location: 15259 - 16761 (+)
Gene ID: Rep_357_c_7_17
Type: pfam
Location: 16782 - 17018 (+)
Gene ID: Rep_357_c_7_18
Type: TC
Location: 17025 - 18161 (+)
Gene ID: Rep_357_c_7_19
Type: TC
Location: 18207 - 18446 (+)
Gene ID: Rep_357_c_7_20
Type: pfam
Location: 18468 - 18965 (+)
Gene ID: Rep_357_c_7_21
Type: pfam
Location: 18971 - 19522 (+)
Gene ID: Rep_357_c_7_22
Type: TC
Location: 19577 - 21148 (+)
Gene ID: Rep_357_c_7_23
Type: TC
Location: 21159 - 22043 (+)
Gene ID: Rep_357_c_7_24
Type: STP
Location: 22098 - 22697 (+)
Gene ID: Rep_357_c_7_25
Type: pfam
Location: 22739 - 23251 (+)
Gene ID: Rep_357_c_7_26
Type: TC
Location: 23258 - 23569 (+)
Gene ID: Rep_357_c_7_27
Type: TC
Location: 23575 - 25584 (+)
Gene ID: Rep_357_c_7_28
Type: TC
Location: 25628 - 27154 (+)
Gene ID: Rep_357_c_7_29
Type: TC
Location: 27178 - 28656 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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