dbCAN Logo

Cluster: Rep_357_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_357_c_126 Rep_357_c_126_16 20336 21742 - GH28
TC Rep_357_c_126 Rep_357_c_126_17 22126 23259 + 2.A.1.7.9
STP Rep_357_c_126 Rep_357_c_126_18 23262 24140 + PfkB
pfam Rep_357_c_126 Rep_357_c_126_19 24137 24760 + FMN_red
TC Rep_357_c_126 Rep_357_c_126_20 24753 27236 - 3.A.1.2.17
pfam Rep_357_c_126 Rep_357_c_126_21 27349 27996 + PRK
TC Rep_357_c_126 Rep_357_c_126_22 27996 28907 + 1.B.42.1.2
Gene ID: Rep_357_c_126_16
Type: CAZyme
Location: 20336 - 21742 (-)
Gene ID: Rep_357_c_126_17
Type: TC
Location: 22126 - 23259 (+)
Gene ID: Rep_357_c_126_18
Type: STP
Location: 23262 - 24140 (+)
Gene ID: Rep_357_c_126_19
Type: pfam
Location: 24137 - 24760 (+)
Gene ID: Rep_357_c_126_20
Type: TC
Location: 24753 - 27236 (-)
Gene ID: Rep_357_c_126_21
Type: pfam
Location: 27349 - 27996 (+)
Gene ID: Rep_357_c_126_22
Type: TC
Location: 27996 - 28907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List