Cluster: Rep_357_CGC39
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate:
- Genome ID: Rep_357
- CGC Family ID: CGCFAM_01503
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_357_c_116 | Rep_357_c_116_12 | 14847 | 18464 | - | GH38 |
| peptidase | Rep_357_c_116 | Rep_357_c_116_13 | 18492 | 19316 | - | S09.UNW |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_14 | 19318 | 21594 | - | GH92 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_15 | 21600 | 23771 | - | GH31_1 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_16 | 24075 | 26108 | + | GH127 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_17 | 26265 | 28745 | + | GH3 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_18 | 28742 | 30769 | + | GH127 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_19 | 30777 | 32732 | + | GH97 |
| TC | Rep_357_c_116 | Rep_357_c_116_20 | 32729 | 33730 | + | 8.A.5.1.6 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_21 | 33727 | 36927 | + | GH2 |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_22 | 36973 | 39126 | + | GH92 |
| NULL(UNKNOWN) | Rep_357_c_116 | Rep_357_c_116_23 | 39410 | 39751 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_357_c_116 | Rep_357_c_116_24 | 39982 | 43119 | + | 1.B.14.6.1 |
| pfam | Rep_357_c_116 | Rep_357_c_116_25 | 43135 | 44748 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_357_c_116 | Rep_357_c_116_26 | 44872 | 46035 | + | SusE |
| CAZyme | Rep_357_c_116 | Rep_357_c_116_27 | 46058 | 47281 | + | GH76 |
Gene ID: Rep_357_c_116_12
Type: CAZyme
Location: 14847 - 18464 (-)
Type: CAZyme
Location: 14847 - 18464 (-)
Gene ID: Rep_357_c_116_13
Type: peptidase
Location: 18492 - 19316 (-)
Type: peptidase
Location: 18492 - 19316 (-)
Gene ID: Rep_357_c_116_14
Type: CAZyme
Location: 19318 - 21594 (-)
Type: CAZyme
Location: 19318 - 21594 (-)
Gene ID: Rep_357_c_116_15
Type: CAZyme
Location: 21600 - 23771 (-)
Type: CAZyme
Location: 21600 - 23771 (-)
Gene ID: Rep_357_c_116_16
Type: CAZyme
Location: 24075 - 26108 (+)
Type: CAZyme
Location: 24075 - 26108 (+)
Gene ID: Rep_357_c_116_17
Type: CAZyme
Location: 26265 - 28745 (+)
Type: CAZyme
Location: 26265 - 28745 (+)
Gene ID: Rep_357_c_116_18
Type: CAZyme
Location: 28742 - 30769 (+)
Type: CAZyme
Location: 28742 - 30769 (+)
Gene ID: Rep_357_c_116_19
Type: CAZyme
Location: 30777 - 32732 (+)
Type: CAZyme
Location: 30777 - 32732 (+)
Gene ID: Rep_357_c_116_20
Type: TC
Location: 32729 - 33730 (+)
Type: TC
Location: 32729 - 33730 (+)
Gene ID: Rep_357_c_116_21
Type: CAZyme
Location: 33727 - 36927 (+)
Type: CAZyme
Location: 33727 - 36927 (+)
Gene ID: Rep_357_c_116_22
Type: CAZyme
Location: 36973 - 39126 (+)
Type: CAZyme
Location: 36973 - 39126 (+)
Gene ID: Rep_357_c_116_23
Type:
Location: 39410 - 39751 (-)
Type:
Location: 39410 - 39751 (-)
Gene ID: Rep_357_c_116_24
Type: TC
Location: 39982 - 43119 (+)
Type: TC
Location: 39982 - 43119 (+)
Gene ID: Rep_357_c_116_25
Type: pfam
Location: 43135 - 44748 (+)
Type: pfam
Location: 43135 - 44748 (+)
Gene ID: Rep_357_c_116_26
Type: pfam
Location: 44872 - 46035 (+)
Type: pfam
Location: 44872 - 46035 (+)
Gene ID: Rep_357_c_116_27
Type: CAZyme
Location: 46058 - 47281 (+)
Type: CAZyme
Location: 46058 - 47281 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp905202215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.