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Cluster: Rep_357_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_357_c_107 Rep_357_c_107_35 33905 34795 + GT2
CAZyme Rep_357_c_107 Rep_357_c_107_36 34753 35943 + GT4
CAZyme Rep_357_c_107 Rep_357_c_107_37 35919 37121 + GT4
TC Rep_357_c_107 Rep_357_c_107_38 37130 38179 + 9.B.18.2.1
pfam Rep_357_c_107 Rep_357_c_107_39 38179 39375 + Epimerase | Polysacc_synt_C
pfam Rep_357_c_107 Rep_357_c_107_40 39419 40600 + Epimerase_2
CAZyme Rep_357_c_107 Rep_357_c_107_41 40604 41809 + GT4
TC Rep_357_c_107 Rep_357_c_107_42 41806 42420 + 9.B.18.1.2
Gene ID: Rep_357_c_107_35
Type: CAZyme
Location: 33905 - 34795 (+)
Gene ID: Rep_357_c_107_36
Type: CAZyme
Location: 34753 - 35943 (+)
Gene ID: Rep_357_c_107_37
Type: CAZyme
Location: 35919 - 37121 (+)
Gene ID: Rep_357_c_107_38
Type: TC
Location: 37130 - 38179 (+)
Gene ID: Rep_357_c_107_39
Type: pfam
Location: 38179 - 39375 (+)
Gene ID: Rep_357_c_107_40
Type: pfam
Location: 39419 - 40600 (+)
Gene ID: Rep_357_c_107_41
Type: CAZyme
Location: 40604 - 41809 (+)
Gene ID: Rep_357_c_107_42
Type: TC
Location: 41806 - 42420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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