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Cluster: Rep_357_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_357_c_92 Rep_357_c_92_2 1202 2380 + GH172
pfam Rep_357_c_92 Rep_357_c_92_3 2520 6839 + Cleaved_Adhesin
TC Rep_357_c_92 Rep_357_c_92_4 6912 8021 - 3.A.1.105.4
TC Rep_357_c_92 Rep_357_c_92_5 8031 9074 - 3.A.1.105.15
TC Rep_357_c_92 Rep_357_c_92_6 9074 9817 - 3.A.1.105.15
TC Rep_357_c_92 Rep_357_c_92_7 9807 10721 - 3.A.1.105.15
Gene ID: Rep_357_c_92_2
Type: CAZyme
Location: 1202 - 2380 (+)
Gene ID: Rep_357_c_92_3
Type: pfam
Location: 2520 - 6839 (+)
Gene ID: Rep_357_c_92_4
Type: TC
Location: 6912 - 8021 (-)
Gene ID: Rep_357_c_92_5
Type: TC
Location: 8031 - 9074 (-)
Gene ID: Rep_357_c_92_6
Type: TC
Location: 9074 - 9817 (-)
Gene ID: Rep_357_c_92_7
Type: TC
Location: 9807 - 10721 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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