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Cluster: Rep_357_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_357_c_53 Rep_357_c_53_15 21065 22312 + 2.A.119.1.2
pfam Rep_357_c_53 Rep_357_c_53_16 22388 23560 + HlyD_3 | Biotin_lipoyl_2
TC Rep_357_c_53 Rep_357_c_53_17 23572 26664 + 2.A.6.1.16
CAZyme Rep_357_c_53 Rep_357_c_53_18 26661 29846 + GH106
pfam Rep_357_c_53 Rep_357_c_53_19 29851 31038 + OEP | OEP
pfam Rep_357_c_53 Rep_357_c_53_20 31035 31976 + Acetyltransf_6
TC Rep_357_c_53 Rep_357_c_53_21 31967 32629 + 3.A.1.140.1
Gene ID: Rep_357_c_53_15
Type: TC
Location: 21065 - 22312 (+)
Gene ID: Rep_357_c_53_16
Type: pfam
Location: 22388 - 23560 (+)
Gene ID: Rep_357_c_53_17
Type: TC
Location: 23572 - 26664 (+)
Gene ID: Rep_357_c_53_18
Type: CAZyme
Location: 26661 - 29846 (+)
Gene ID: Rep_357_c_53_19
Type: pfam
Location: 29851 - 31038 (+)
Gene ID: Rep_357_c_53_20
Type: pfam
Location: 31035 - 31976 (+)
Gene ID: Rep_357_c_53_21
Type: TC
Location: 31967 - 32629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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